Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha3Q91Y16 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha3Q91Y16 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdha3Q91Y16 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha3Q91Y16 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Gm44549-201ENSMUST00000208351 577 ntBASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Fst-202ENSMUST00000223640 2612 ntBASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha3Q91Y16 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha3Q91Y16 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha3Q91Y16 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms