Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb5Q91XZ5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdhb5Q91XZ5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdhb5Q91XZ5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb5Q91XZ5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb5Q91XZ5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb5Q91XZ5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb5Q91XZ5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb5Q91XZ5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 BC021767-201ENSMUST00000126387 1716 ntBASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhb5Q91XZ5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb5Q91XZ5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdhb5Q91XZ5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb5Q91XZ5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb5Q91XZ5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Gm7889-201ENSMUST00000185591 958 ntBASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb5Q91XZ5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhb5Q91XZ5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb5Q91XZ5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb5Q91XZ5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb5Q91XZ5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhb5Q91XZ5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms