Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhga9Q91XX9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga9Q91XX9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga9Q91XX9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga9Q91XX9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga9Q91XX9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga9Q91XX9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdhga9Q91XX9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms