Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb1Q91XX8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Mir6982-201ENSMUST00000184354 68 ntBASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb1Q91XX8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb1Q91XX8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb1Q91XX8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.72■□□□□ 0.59
Pcdhgb1Q91XX8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb1Q91XX8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms