Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgc5Q91XW9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgc5Q91XW9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgc5Q91XW9 Mir5122-201ENSMUST00000175004 89 ntBASIC20.58■□□□□ 0.89
Pcdhgc5Q91XW9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgc5Q91XW9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgc5Q91XW9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdhgc5Q91XW9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc5Q91XW9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc5Q91XW9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgc5Q91XW9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Pcdhgc5Q91XW9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgc5Q91XW9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgc5Q91XW9 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Gm5417-201ENSMUST00000079706 384 ntBASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgc5Q91XW9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm10231-201ENSMUST00000181584 441 ntBASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm43799-201ENSMUST00000201845 579 ntBASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm10175-202ENSMUST00000208752 441 ntBASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms