Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.78■□□□□ 0.92
Trex1Q91XB0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trex1Q91XB0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.77■□□□□ 0.92
Trex1Q91XB0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trex1Q91XB0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trex1Q91XB0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.76■□□□□ 0.91
Trex1Q91XB0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.76■□□□□ 0.91
Trex1Q91XB0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trex1Q91XB0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.75■□□□□ 0.91
Trex1Q91XB0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.74■□□□□ 0.91
Trex1Q91XB0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trex1Q91XB0 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.74■□□□□ 0.91
Trex1Q91XB0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.73■□□□□ 0.91
Trex1Q91XB0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Gm7889-201ENSMUST00000185591 958 ntBASIC20.72■□□□□ 0.91
Trex1Q91XB0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trex1Q91XB0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trex1Q91XB0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trex1Q91XB0 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.7■□□□□ 0.9
Trex1Q91XB0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.7■□□□□ 0.9
Trex1Q91XB0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trex1Q91XB0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms