Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx41Q91VN6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx41Q91VN6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Fst-202ENSMUST00000223640 2612 ntBASIC20.65■□□□□ 0.9
Ddx41Q91VN6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx41Q91VN6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Ddx41Q91VN6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx41Q91VN6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx41Q91VN6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Ddx41Q91VN6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx41Q91VN6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx41Q91VN6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Gm2399-201ENSMUST00000104944 225 ntBASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx41Q91VN6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms