Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Snx9Q91VH2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Snx9Q91VH2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.96■□□□□ 0.63
Snx9Q91VH2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.96■□□□□ 0.63
Snx9Q91VH2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.96■□□□□ 0.63
Snx9Q91VH2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snx9Q91VH2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.95■□□□□ 0.62
Snx9Q91VH2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.95■□□□□ 0.62
Snx9Q91VH2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.95■□□□□ 0.62
Snx9Q91VH2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.94■□□□□ 0.62
Snx9Q91VH2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx9Q91VH2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.93■□□□□ 0.62
Snx9Q91VH2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snx9Q91VH2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.92■□□□□ 0.62
Snx9Q91VH2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Gm10812-201ENSMUST00000099864 546 ntBASIC18.92■□□□□ 0.62
Snx9Q91VH2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Snx9Q91VH2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx9Q91VH2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms