Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.15■□□□□ 0.02
H1fooQ8VIK3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.15■□□□□ 0.02
H1fooQ8VIK3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H1fooQ8VIK3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H1fooQ8VIK3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Fst-202ENSMUST00000223640 2612 ntBASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H1fooQ8VIK3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.12■□□□□ 0.01
H1fooQ8VIK3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.11■□□□□ 0.01
H1fooQ8VIK3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.11■□□□□ 0.01
H1fooQ8VIK3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Rarb-207ENSMUST00000225921 2756 ntBASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H1fooQ8VIK3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H1fooQ8VIK3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H1fooQ8VIK3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
H1fooQ8VIK3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms