Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.53■□□□□ 0.08
Cspg4Q8VHY0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cspg4Q8VHY0 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Gm2274-201ENSMUST00000184539 609 ntBASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cspg4Q8VHY0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cspg4Q8VHY0 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm18115-201ENSMUST00000221209 621 ntBASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm6623-201ENSMUST00000173570 544 ntBASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cspg4Q8VHY0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cspg4Q8VHY0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms