Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Gm27801-201ENSMUST00000184174 223 ntBASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Gm11421-201ENSMUST00000122124 294 ntBASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Rab40cQ8VHQ4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Tgds-204ENSMUST00000228543 1594 ntBASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rab40cQ8VHQ4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rab40cQ8VHQ4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rab40cQ8VHQ4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms