Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lmcd1Q8VEE1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lmcd1Q8VEE1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lmcd1Q8VEE1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Gm17808-201ENSMUST00000200859 894 ntBASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lmcd1Q8VEE1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lmcd1Q8VEE1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Mir2861-201ENSMUST00000175539 82 ntBASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Mir1668-201ENSMUST00000184114 107 ntBASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Gm18115-201ENSMUST00000221209 621 ntBASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lmcd1Q8VEE1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Gm27357-201ENSMUST00000183754 135 ntBASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms