Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx39aQ8VDW0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx39aQ8VDW0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
Ddx39aQ8VDW0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx39aQ8VDW0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx39aQ8VDW0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Mir5122-201ENSMUST00000175004 89 ntBASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx39aQ8VDW0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx39aQ8VDW0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Gm5417-201ENSMUST00000079706 384 ntBASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ddx39aQ8VDW0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx39aQ8VDW0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms