Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20aQ8VDB9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20aQ8VDB9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a20aQ8VDB9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a20aQ8VDB9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.78■□□□□ 0.44
Slc6a20aQ8VDB9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a20aQ8VDB9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a20aQ8VDB9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a20aQ8VDB9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a20aQ8VDB9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms