Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Gm2559-201ENSMUST00000201323 363 ntBASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Gm12441-201ENSMUST00000121806 588 ntBASIC19.83■□□□□ 0.77
Rpap2Q8VC34 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.83■□□□□ 0.77
Rpap2Q8VC34 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Grk6-206ENSMUST00000224995 2971 ntBASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap2Q8VC34 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap2Q8VC34 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Dio3-201ENSMUST00000097228 1449 ntBASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap2Q8VC34 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Gm11927-201ENSMUST00000118472 759 ntBASIC19.8■□□□□ 0.76
Rpap2Q8VC34 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap2Q8VC34 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap2Q8VC34 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Gm12896-201ENSMUST00000118430 226 ntBASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rpap2Q8VC34 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms