Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp33Q8R5K2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Mir6349-201ENSMUST00000184059 97 ntBASIC20.77■□□□□ 0.92
Usp33Q8R5K2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp33Q8R5K2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp33Q8R5K2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Gm18959-201ENSMUST00000208954 655 ntBASIC20.76■□□□□ 0.91
Usp33Q8R5K2 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.76■□□□□ 0.91
Usp33Q8R5K2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Usp33Q8R5K2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.75■□□□□ 0.91
Usp33Q8R5K2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp33Q8R5K2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp33Q8R5K2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp33Q8R5K2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Gm12085-201ENSMUST00000119263 940 ntBASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Gm23634-201ENSMUST00000175071 91 ntBASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp33Q8R5K2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp33Q8R5K2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp33Q8R5K2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms