Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Gm13148-201ENSMUST00000118892 745 ntBASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln1Q8R317 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln1Q8R317 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln1Q8R317 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubqln1Q8R317 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Gm10602-201ENSMUST00000098239 609 ntBASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubqln1Q8R317 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubqln1Q8R317 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubqln1Q8R317 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms