Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atf7Q8R0S1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf7Q8R0S1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Atf7Q8R0S1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atf7Q8R0S1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atf7Q8R0S1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atf7Q8R0S1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atf7Q8R0S1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.32■■□□□ 1
Atf7Q8R0S1 Gm2399-201ENSMUST00000104944 225 ntBASIC21.32■■□□□ 1
Atf7Q8R0S1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.32■■□□□ 1
Atf7Q8R0S1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.32■■□□□ 1
Atf7Q8R0S1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atf7Q8R0S1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atf7Q8R0S1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Atf7Q8R0S1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf7Q8R0S1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.31■■□□□ 1
Atf7Q8R0S1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.31■■□□□ 1
Atf7Q8R0S1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atf7Q8R0S1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atf7Q8R0S1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atf7Q8R0S1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atf7Q8R0S1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Atf7Q8R0S1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Atf7Q8R0S1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atf7Q8R0S1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Atf7Q8R0S1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atf7Q8R0S1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.3■■□□□ 1
Atf7Q8R0S1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.3■■□□□ 1
Atf7Q8R0S1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.3■■□□□ 1
Atf7Q8R0S1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Atf7Q8R0S1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf7Q8R0S1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.28■■□□□ 1
Atf7Q8R0S1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Atf7Q8R0S1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.28■■□□□ 1
Atf7Q8R0S1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.28■■□□□ 1
Atf7Q8R0S1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Atf7Q8R0S1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.28■■□□□ 1
Atf7Q8R0S1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Atf7Q8R0S1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf7Q8R0S1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.27■■□□□ 1
Atf7Q8R0S1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.27■■□□□ 1
Atf7Q8R0S1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atf7Q8R0S1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.27■■□□□ 1
Atf7Q8R0S1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.27■■□□□ 1
Atf7Q8R0S1 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.27■■□□□ 1
Atf7Q8R0S1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atf7Q8R0S1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.27■■□□□ 1
Atf7Q8R0S1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atf7Q8R0S1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atf7Q8R0S1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atf7Q8R0S1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Atf7Q8R0S1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Atf7Q8R0S1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Gm38285-201ENSMUST00000192928 922 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms