Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sf3a1Q8K4Z5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sf3a1Q8K4Z5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sf3a1Q8K4Z5 Flg-201ENSMUST00000050758 1488 ntBASIC22.08■■□□□ 1.12
Sf3a1Q8K4Z5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Sf3a1Q8K4Z5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Zfp783-201ENSMUST00000095946 670 ntBASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sf3a1Q8K4Z5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Gm11927-201ENSMUST00000118472 759 ntBASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Gm37856-201ENSMUST00000191634 999 ntBASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.05■■□□□ 1.12
Sf3a1Q8K4Z5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Gm27275-201ENSMUST00000184318 272 ntBASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Gm38285-201ENSMUST00000192928 922 ntBASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sf3a1Q8K4Z5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sf3a1Q8K4Z5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Gm11249-201ENSMUST00000117071 859 ntBASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Gm10653-202ENSMUST00000139570 835 ntBASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Sf3a1Q8K4Z5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Sf3a1Q8K4Z5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sf3a1Q8K4Z5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sf3a1Q8K4Z5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.02■■□□□ 1.11
Sf3a1Q8K4Z5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Tgds-204ENSMUST00000228543 1594 ntBASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms