Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Mir3081-201ENSMUST00000175305 84 ntBASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx54Q8K4L0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gm7370-201ENSMUST00000219471 767 ntBASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm4974-201ENSMUST00000209974 875 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm7791-201ENSMUST00000219066 539 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm18115-201ENSMUST00000221209 621 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mir1668-201ENSMUST00000184114 107 ntBASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Otx2os1-206ENSMUST00000228153 787 ntBASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx54Q8K4L0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms