Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Mir3081-201ENSMUST00000175305 84 ntBASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx54Q8K4L0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx54Q8K4L0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx54Q8K4L0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gm7370-201ENSMUST00000219471 767 ntBASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx54Q8K4L0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx54Q8K4L0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm4974-201ENSMUST00000209974 875 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm7791-201ENSMUST00000219066 539 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gm18115-201ENSMUST00000221209 621 ntBASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ddx54Q8K4L0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ddx54Q8K4L0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mir1668-201ENSMUST00000184114 107 ntBASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Otx2os1-206ENSMUST00000228153 787 ntBASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx54Q8K4L0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx54Q8K4L0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx54Q8K4L0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms