Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Flg-201ENSMUST00000050758 1488 ntBASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Gm38285-201ENSMUST00000192928 922 ntBASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Zfp783-201ENSMUST00000095946 670 ntBASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtn1Q8K0T0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Rtn1Q8K0T0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rtn1Q8K0T0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rtn1Q8K0T0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Rtn1Q8K0T0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.82■□□□□ 0.92
Rtn1Q8K0T0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Dio3-201ENSMUST00000097228 1449 ntBASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Gm11927-201ENSMUST00000118472 759 ntBASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Rtn1Q8K0T0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtn1Q8K0T0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.79■□□□□ 0.92
Rtn1Q8K0T0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms