Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgcll1Q8JZS7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgcll1Q8JZS7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmgcll1Q8JZS7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgcll1Q8JZS7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.64■□□□□ 0.57
Hmgcll1Q8JZS7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgcll1Q8JZS7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Gm715-201ENSMUST00000117865 831 ntBASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgcll1Q8JZS7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgcll1Q8JZS7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Mir6982-201ENSMUST00000184354 68 ntBASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgcll1Q8JZS7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgcll1Q8JZS7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgcll1Q8JZS7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.58■□□□□ 0.57
Hmgcll1Q8JZS7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgcll1Q8JZS7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hmgcll1Q8JZS7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgcll1Q8JZS7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgcll1Q8JZS7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmgcll1Q8JZS7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgcll1Q8JZS7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms