Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Gm5408-201ENSMUST00000197998 747 ntBASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfwd3Q8CIK8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfwd3Q8CIK8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfwd3Q8CIK8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfwd3Q8CIK8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rfwd3Q8CIK8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rfwd3Q8CIK8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfwd3Q8CIK8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rfwd3Q8CIK8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Gm44549-201ENSMUST00000208351 577 ntBASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfwd3Q8CIK8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms