Protein–RNA interactions for Protein: Q8CHP6

Phc3, Polyhomeotic-like protein 3, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phc3Q8CHP6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phc3Q8CHP6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phc3Q8CHP6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phc3Q8CHP6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Phc3Q8CHP6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phc3Q8CHP6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phc3Q8CHP6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Phc3Q8CHP6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Phc3Q8CHP6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Phc3Q8CHP6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phc3Q8CHP6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phc3Q8CHP6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms