Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm42569-201ENSMUST00000200539 472 ntBASIC20.68■□□□□ 0.9
Smc2Q8CG48 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc2Q8CG48 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc2Q8CG48 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc2Q8CG48 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc2Q8CG48 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Gm6365-201ENSMUST00000054711 744 ntBASIC20.66■□□□□ 0.9
Smc2Q8CG48 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Tgds-204ENSMUST00000228543 1594 ntBASIC20.66■□□□□ 0.9
Smc2Q8CG48 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc2Q8CG48 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Gm26571-201ENSMUST00000181399 666 ntBASIC20.65■□□□□ 0.9
Smc2Q8CG48 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.65■□□□□ 0.9
Smc2Q8CG48 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Smc2Q8CG48 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc2Q8CG48 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc2Q8CG48 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Gm7290-201ENSMUST00000104990 617 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Gm12918-201ENSMUST00000120234 636 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Gm15710-201ENSMUST00000121821 636 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Gm5075-201ENSMUST00000196916 622 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.64■□□□□ 0.89
Smc2Q8CG48 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smc2Q8CG48 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc2Q8CG48 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smc2Q8CG48 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.62■□□□□ 0.89
Smc2Q8CG48 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Smc2Q8CG48 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.62■□□□□ 0.89
Smc2Q8CG48 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc2Q8CG48 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc2Q8CG48 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc2Q8CG48 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc2Q8CG48 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms