Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.44■■□□□ 1.18
Trim52Q8CDV4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim52Q8CDV4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim52Q8CDV4 Notumos-201ENSMUST00000151998 2659 ntBASIC22.44■■□□□ 1.18
Trim52Q8CDV4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Tgds-204ENSMUST00000228543 1594 ntBASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Gm10517-202ENSMUST00000192970 758 ntBASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim52Q8CDV4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim52Q8CDV4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Gm7889-201ENSMUST00000185591 958 ntBASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim52Q8CDV4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim52Q8CDV4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim52Q8CDV4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim52Q8CDV4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
Trim52Q8CDV4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Trim52Q8CDV4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trim52Q8CDV4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim52Q8CDV4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim52Q8CDV4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim52Q8CDV4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trim52Q8CDV4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Gm12085-201ENSMUST00000119263 940 ntBASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim52Q8CDV4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms