Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lysmd4Q8CC84 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd4Q8CC84 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd4Q8CC84 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lysmd4Q8CC84 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lysmd4Q8CC84 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd4Q8CC84 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.19■□□□□ 0.18
Lysmd4Q8CC84 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms