Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf170Q8CBG9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf170Q8CBG9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf170Q8CBG9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf170Q8CBG9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf170Q8CBG9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf170Q8CBG9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Gm13234-201ENSMUST00000120010 747 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf170Q8CBG9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf170Q8CBG9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf170Q8CBG9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf170Q8CBG9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms