Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc46a2Q8CA03 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc46a2Q8CA03 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.35■□□□□ 0.37
Slc46a2Q8CA03 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc46a2Q8CA03 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slc46a2Q8CA03 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Slc46a2Q8CA03 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.33■□□□□ 0.37
Slc46a2Q8CA03 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc46a2Q8CA03 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Gm8493-201ENSMUST00000196881 489 ntBASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc46a2Q8CA03 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slc46a2Q8CA03 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms