Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.75■□□□□ 0.75
Lin9Q8C735 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Lin9Q8C735 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.75■□□□□ 0.75
Lin9Q8C735 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
Lin9Q8C735 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.75■□□□□ 0.75
Lin9Q8C735 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lin9Q8C735 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.74■□□□□ 0.75
Lin9Q8C735 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.74■□□□□ 0.75
Lin9Q8C735 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.74■□□□□ 0.75
Lin9Q8C735 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.74■□□□□ 0.75
Lin9Q8C735 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.74■□□□□ 0.75
Lin9Q8C735 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lin9Q8C735 Gm10812-201ENSMUST00000099864 546 ntBASIC19.74■□□□□ 0.75
Lin9Q8C735 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lin9Q8C735 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lin9Q8C735 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.73■□□□□ 0.75
Lin9Q8C735 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lin9Q8C735 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.73■□□□□ 0.75
Lin9Q8C735 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lin9Q8C735 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lin9Q8C735 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.72■□□□□ 0.75
Lin9Q8C735 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lin9Q8C735 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lin9Q8C735 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Lin9Q8C735 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.71■□□□□ 0.75
Lin9Q8C735 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.71■□□□□ 0.75
Lin9Q8C735 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lin9Q8C735 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lin9Q8C735 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lin9Q8C735 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lin9Q8C735 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.7■□□□□ 0.74
Lin9Q8C735 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.7■□□□□ 0.74
Lin9Q8C735 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lin9Q8C735 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lin9Q8C735 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Lin9Q8C735 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.7■□□□□ 0.74
Lin9Q8C735 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lin9Q8C735 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Lin9Q8C735 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin9Q8C735 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin9Q8C735 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin9Q8C735 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lin9Q8C735 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin9Q8C735 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lin9Q8C735 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin9Q8C735 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms