Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3rf3Q8C120 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3rf3Q8C120 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3rf3Q8C120 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3rf3Q8C120 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Sh3rf3Q8C120 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3rf3Q8C120 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Gm26524-201ENSMUST00000192339 390 ntBASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3rf3Q8C120 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Gm12933-201ENSMUST00000120203 872 ntBASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Tgds-204ENSMUST00000228543 1594 ntBASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3rf3Q8C120 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3rf3Q8C120 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf3Q8C120 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms