Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Gm10138-203ENSMUST00000206952 366 ntBASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim47Q8C0E3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Gm15378-201ENSMUST00000121894 207 ntBASIC20■□□□□ 0.79
Trim47Q8C0E3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20■□□□□ 0.79
Trim47Q8C0E3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim47Q8C0E3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim47Q8C0E3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim47Q8C0E3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.97■□□□□ 0.79
Trim47Q8C0E3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim47Q8C0E3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Gm10252-201ENSMUST00000209541 832 ntBASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim47Q8C0E3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim47Q8C0E3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms