Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp43Q8BUM9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp43Q8BUM9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.28■□□□□ 0.52
Usp43Q8BUM9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp43Q8BUM9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.27■□□□□ 0.52
Usp43Q8BUM9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp43Q8BUM9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Usp43Q8BUM9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp43Q8BUM9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Zfp783-201ENSMUST00000095946 670 ntBASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms