Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Mir1199-201ENSMUST00000117015 119 ntBASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Mir6349-201ENSMUST00000184059 97 ntBASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.12■□□□□ 0.33
Cdk5rap1Q8BTW8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdk5rap1Q8BTW8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Mir6982-201ENSMUST00000184354 68 ntBASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdk5rap1Q8BTW8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm715-201ENSMUST00000117865 831 ntBASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdk5rap1Q8BTW8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap1Q8BTW8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap1Q8BTW8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.08■□□□□ 0.33
Cdk5rap1Q8BTW8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Cdk5rap1Q8BTW8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms