Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig4Q8BTF7 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lig4Q8BTF7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lig4Q8BTF7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Gm10138-203ENSMUST00000206952 366 ntBASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lig4Q8BTF7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lig4Q8BTF7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lig4Q8BTF7 Gm15378-201ENSMUST00000121894 207 ntBASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lig4Q8BTF7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lig4Q8BTF7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lig4Q8BTF7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms