Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scfd1Q8BRF7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scfd1Q8BRF7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scfd1Q8BRF7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Gm13836-201ENSMUST00000121159 501 ntBASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Scfd1Q8BRF7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Odf3b-204ENSMUST00000227834 930 ntBASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scfd1Q8BRF7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Timm23-208ENSMUST00000226683 750 ntBASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scfd1Q8BRF7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scfd1Q8BRF7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scfd1Q8BRF7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Gm11643-201ENSMUST00000119578 864 ntBASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scfd1Q8BRF7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scfd1Q8BRF7 Tgds-204ENSMUST00000228543 1594 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms