Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Gm43530-201ENSMUST00000195920 274 ntBASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl3Q8BLF2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Gm15546-201ENSMUST00000122095 826 ntBASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cdkl3Q8BLF2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl3Q8BLF2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl3Q8BLF2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl3Q8BLF2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkl3Q8BLF2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdkl3Q8BLF2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkl3Q8BLF2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms