Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp2bQ8BJF9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp2bQ8BJF9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp2bQ8BJF9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp2bQ8BJF9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp2bQ8BJF9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp2bQ8BJF9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp2bQ8BJF9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp2bQ8BJF9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp2bQ8BJF9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms