Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf38Q8BI21 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf38Q8BI21 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf38Q8BI21 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf38Q8BI21 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Gm13234-201ENSMUST00000120010 747 ntBASIC17.39■□□□□ 0.37
Rnf38Q8BI21 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Gm18284-201ENSMUST00000172604 624 ntBASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf38Q8BI21 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.38■□□□□ 0.37
Rnf38Q8BI21 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.38■□□□□ 0.37
Rnf38Q8BI21 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf38Q8BI21 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Gm5874-201ENSMUST00000096101 508 ntBASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms