Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Scn3bQ8BHK2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn3bQ8BHK2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn3bQ8BHK2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn3bQ8BHK2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Golgb1-201ENSMUST00000023534 498 ntBASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scn3bQ8BHK2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Spcs1-204ENSMUST00000226782 949 ntBASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Gm9959-201ENSMUST00000068277 390 ntBASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn3bQ8BHK2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn3bQ8BHK2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms