Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim6Q8BGE7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.18■□□□□ 0.66
Trim6Q8BGE7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim6Q8BGE7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim6Q8BGE7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim6Q8BGE7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim6Q8BGE7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim6Q8BGE7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim6Q8BGE7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms