Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc3Q8BG54 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.62■■□□□ 1.05
Sptlc3Q8BG54 Tgds-204ENSMUST00000228543 1594 ntBASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc3Q8BG54 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Gm12382-201ENSMUST00000122005 922 ntBASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc3Q8BG54 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.59■■□□□ 1.05
Sptlc3Q8BG54 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc3Q8BG54 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.58■■□□□ 1.04
Sptlc3Q8BG54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sptlc3Q8BG54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sptlc3Q8BG54 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sptlc3Q8BG54 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sptlc3Q8BG54 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Gm21814-202ENSMUST00000203277 873 ntBASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Gm5417-201ENSMUST00000079706 384 ntBASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.57■■□□□ 1.04
Sptlc3Q8BG54 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc3Q8BG54 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms