Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.79■□□□□ 0.44
Ubp1Q811S7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubp1Q811S7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.77■□□□□ 0.44
Ubp1Q811S7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubp1Q811S7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ubp1Q811S7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.77■□□□□ 0.43
Ubp1Q811S7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.77■□□□□ 0.43
Ubp1Q811S7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ubp1Q811S7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubp1Q811S7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubp1Q811S7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubp1Q811S7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Ubp1Q811S7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubp1Q811S7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubp1Q811S7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.75■□□□□ 0.43
Ubp1Q811S7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.75■□□□□ 0.43
Ubp1Q811S7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubp1Q811S7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.75■□□□□ 0.43
Ubp1Q811S7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubp1Q811S7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.75■□□□□ 0.43
Ubp1Q811S7 Fst-202ENSMUST00000223640 2612 ntBASIC17.75■□□□□ 0.43
Ubp1Q811S7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubp1Q811S7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.74■□□□□ 0.43
Ubp1Q811S7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.74■□□□□ 0.43
Ubp1Q811S7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubp1Q811S7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.74■□□□□ 0.43
Ubp1Q811S7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.73■□□□□ 0.43
Ubp1Q811S7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.73■□□□□ 0.43
Ubp1Q811S7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ubp1Q811S7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubp1Q811S7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms