Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp8Q80U87 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Gm10493-201ENSMUST00000097270 612 ntBASIC18.11■□□□□ 0.49
Usp8Q80U87 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.11■□□□□ 0.49
Usp8Q80U87 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp8Q80U87 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp8Q80U87 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp8Q80U87 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.1■□□□□ 0.49
Usp8Q80U87 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp8Q80U87 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp8Q80U87 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp8Q80U87 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp8Q80U87 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp8Q80U87 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.09■□□□□ 0.49
Usp8Q80U87 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.09■□□□□ 0.49
Usp8Q80U87 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp8Q80U87 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp8Q80U87 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp8Q80U87 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp8Q80U87 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp8Q80U87 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.09■□□□□ 0.49
Usp8Q80U87 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp8Q80U87 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Usp8Q80U87 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.08■□□□□ 0.49
Usp8Q80U87 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Usp8Q80U87 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp8Q80U87 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Usp8Q80U87 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Usp8Q80U87 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp8Q80U87 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp8Q80U87 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp8Q80U87 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Usp8Q80U87 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.08■□□□□ 0.48
Usp8Q80U87 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.08■□□□□ 0.48
Usp8Q80U87 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.08■□□□□ 0.48
Usp8Q80U87 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp8Q80U87 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp8Q80U87 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp8Q80U87 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp8Q80U87 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.07■□□□□ 0.48
Usp8Q80U87 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.07■□□□□ 0.48
Usp8Q80U87 Gm42778-201ENSMUST00000199644 553 ntBASIC18.07■□□□□ 0.48
Usp8Q80U87 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.07■□□□□ 0.48
Usp8Q80U87 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp8Q80U87 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp8Q80U87 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp8Q80U87 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp8Q80U87 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.06■□□□□ 0.48
Usp8Q80U87 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp8Q80U87 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp8Q80U87 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp8Q80U87 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp8Q80U87 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp8Q80U87 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp8Q80U87 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms