Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Otub1Q7TQI3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.2■□□□□ 0.34
Otub1Q7TQI3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Nespas-201ENSMUST00000143738 1083 ntBASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Otub1Q7TQI3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gm10033-202ENSMUST00000211874 928 ntBASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gm18671-201ENSMUST00000214826 683 ntBASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Otub1Q7TQI3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Gm6420-201ENSMUST00000193885 723 ntBASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otub1Q7TQI3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Otub1Q7TQI3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otub1Q7TQI3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Gm26571-201ENSMUST00000181399 666 ntBASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otub1Q7TQI3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms