Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.72■□□□□ 0.59
Trim17Q7TPM3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.72■□□□□ 0.59
Trim17Q7TPM3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim17Q7TPM3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim17Q7TPM3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Gm21362-201ENSMUST00000194272 928 ntBASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trim17Q7TPM3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim17Q7TPM3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim17Q7TPM3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Gm10819-201ENSMUST00000099988 561 ntBASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim17Q7TPM3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim17Q7TPM3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms