Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx4Q7TNK1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx4Q7TNK1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx4Q7TNK1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx4Q7TNK1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.32■□□□□ 0.36
Rfx4Q7TNK1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx4Q7TNK1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms