Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup98Q6PFD9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup98Q6PFD9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Nup98Q6PFD9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Gm4974-201ENSMUST00000209974 875 ntBASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.41■■□□□ 1.02
Nup98Q6PFD9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nup98Q6PFD9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Gm18032-201ENSMUST00000222541 538 ntBASIC21.39■■□□□ 1.02
Nup98Q6PFD9 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup98Q6PFD9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.39■■□□□ 1.01
Nup98Q6PFD9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup98Q6PFD9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup98Q6PFD9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup98Q6PFD9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Gm6659-201ENSMUST00000174752 547 ntBASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Gm10517-202ENSMUST00000192970 758 ntBASIC21.38■■□□□ 1.01
Nup98Q6PFD9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Gm18959-201ENSMUST00000208954 655 ntBASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup98Q6PFD9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nup98Q6PFD9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms