Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Gm8495-201ENSMUST00000188740 694 ntBASIC20.08■□□□□ 0.81
Dhx40Q6PE54 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Dhx40Q6PE54 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Reep4-203ENSMUST00000226563 1444 ntBASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dhx40Q6PE54 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dhx40Q6PE54 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.05■□□□□ 0.8
Dhx40Q6PE54 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dhx40Q6PE54 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dhx40Q6PE54 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dhx40Q6PE54 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.02■□□□□ 0.8
Dhx40Q6PE54 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dhx40Q6PE54 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.02■□□□□ 0.8
Dhx40Q6PE54 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dhx40Q6PE54 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Dhx40Q6PE54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Dhx40Q6PE54 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Dhx40Q6PE54 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms