Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd4Q6PDQ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd4Q6PDQ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd4Q6PDQ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd4Q6PDQ2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Gm4217-201ENSMUST00000182243 1002 ntBASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd4Q6PDQ2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Gm4974-201ENSMUST00000209974 875 ntBASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC23.74■■□□□ 1.39
Chd4Q6PDQ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Gm23634-201ENSMUST00000175071 91 ntBASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Chd4Q6PDQ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Gm10517-202ENSMUST00000192970 758 ntBASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Chd4Q6PDQ2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Gm10418-201ENSMUST00000100943 576 ntBASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 Gm7367-201ENSMUST00000057611 492 ntBASIC23.71■■□□□ 1.39
Chd4Q6PDQ2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Chd4Q6PDQ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Gm10013-201ENSMUST00000106074 672 ntBASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.7■■□□□ 1.38
Chd4Q6PDQ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Gm45058-201ENSMUST00000205810 766 ntBASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Gm27463-201ENSMUST00000183569 57 ntBASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd4Q6PDQ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Gm6345-202ENSMUST00000180900 204 ntBASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Chd4Q6PDQ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd4Q6PDQ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms